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Install or Uninstall seq-gen on jollyroger

seq-gensimulate the evolution of nucleotide or amino acid sequences or amino acid sequences along a phylogeny, using common models of the substitution process. A range of models of molecular evolution are implemented including the general reversible model. State frequencies and other parameters of the model may be given and site-specific rate heterogeneity may also be incorporated in a number of ways. Any number of trees may be read in and the program will produce any number of data sets for each tree. Thus large sets of replicate simulations can be easily created. It has been designed to be a general purpose simulator that incorporates most of the commonly usedParrot 3.7non-free/science1.3.3-1

Package Data

Packageseq-gen
Version1.3.3-1
MaintainerDebian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Home pagehttp://tree.bio.ed.ac.uk/software/seqgen/
Descriptionsimulate the evolution of nucleotide or amino acid sequences or amino acid sequences along a phylogeny, using common models of the substitution process. A range of models of molecular evolution are implemented including the general reversible model. State frequencies and other parameters of the model may be given and site-specific rate heterogeneity may also be incorporated in a number of ways. Any number of trees may be read in and the program will produce any number of data sets for each tree. Thus large sets of replicate simulations can be easily created. It has been designed to be a general purpose simulator that incorporates most of the commonly used
Distroparrot
Releasejollyroger
Reponon-free
Sectionnon-free/science